generate_plsr: Identify significant PLSR coefficients for pairs of left and...

In MollahLab/gen3DNet: An R Package for Generating 3D Network Models

Identify significant PLSR coefficients for pairs of left and right objects.

Description

This function computes PLSR coefficients and p-values between the rows of the two matrices provided ("left" and "right"). This regression is performed separately for each left item; i.e. in each iteration, a separate PLS regression is performed which explains

Usage

generate_plsr(left, right, p_val_threshold = 1e-04, verbose = FALSE)

Arguments

left	Matrix of left objects
right	Matrix of right objects
p_val_threshold	Threshold for significant p-values in PLSR.
verbose	Whether to print output.

Details

The maximum number of components for PLSR is the number of columns in the right matrix or the number of rows minus one, whichever is less.

Value

A list containing the following named values: p_list - A list containing left-right pairs with significant values (above p_val_threshold) non_p_list - A list containing left-right pairs with non-significant values comp - the maximum number of PLS components.

MollahLab/gen3DNet documentation built on Nov. 18, 2024, 5:08 a.m.