select.gIDR: Select observations according to gIDR

In MonkeyLB/gIDR: Generalized irreproducibile discovery rate

Description

Select observations that exceeding a given IDR level

Usage

select.gIDR(x, IDR.x, IDR.level)

Arguments

x	a n by m numeric matrix, where m= num of replicates, n=num of observations. Numerical values representing the significance of the observations, where larger values represent higher significance, for example, -log(p-value). Currently, m=2.
IDR.x	Irreproducibile discovery rate for each entry of x. It is computed from est.IDR.discrete().
IDR.level	IDR cutoff, a numerical value between [0, 1]. Typical value is 0.01 or 0.05.

Value

• x: selected reproducible observations given the cutoff.

• n: number of selected reproducible observations.#'

MonkeyLB/gIDR documentation built on May 14, 2019, 10:36 a.m.