find_signal_regions: find signal

In MoseleyBioinformaticsLab/ScanCentricPeakCharacterization: Functionality for Characterizing Peaks in Mass Spectrometry in a Scan-Centric Manner

find signal

Description

Given some regions and point_regions, find the regions that actually should contain real data. See details for an explanation of what is considered real.

Usage

find_signal_regions(
  regions,
  point_regions_list,
  region_percentile = 0.99,
  multiplier = 1.5,
  n_point_region = 2000
)

Arguments

regions	the regions we want to query
point_regions_list	the individual points
region_percentile	the cumulative percentile cutoff to use
multiplier	how much above base quantiles to use (default = 1.5)
n_point_region	how many points make up a large segment to do percentile on?

Value

IRanges

MoseleyBioinformaticsLab/ScanCentricPeakCharacterization documentation built on March 29, 2024, 11:32 p.m.