get_status: Filter a custom taxonomy by GBIF taxonomic status/synonym

In MoultDB/moultdbtools: Create Custom Taxonomies Based on the NCBI Taxonomy and GBIF Backbone Taxonomy

Filter a custom taxonomy by GBIF taxonomic status/synonym

Description

Filter a custom taxonomy by GBIF taxonomic status/synonym

Usage

get_status(x, status = "all")

Arguments

x	A tibble created with load_taxonomies() or load_population() or load_sample().
status	Filter on GBIF assigned status (i.e. NA, "doubtful", "accepted", "proparte synonym", "synonym", "homotypic synonym", "heterotypic synonym"). Can be a string or a vector of strings. Defaults to no filtering.

Value

A filtered tibble.

Examples

get_status(load_sample(), "synonym")
get_status(load_sample(), c("accepted", "doubtful"))

MoultDB/moultdbtools documentation built on Feb. 2, 2024, 5:21 p.m.