Description Usage Arguments Examples
Generate pathway map with patient perturbation data superimposed.
1 2 3 | ## S3 method for class 'pathwayMap'
plot(Pathway.Name, PatientID, patient.zscore,
scalingFactor, outputFilePath)
|
Pathway.Name |
- The name of the pathway map you want to plot patient data on. |
PatientID |
- An identifier string associated with the patient. |
patient.zscore |
- A named vector of metabolites with corresponding z-scores. |
scalingFactor |
- Integer associated with increase in node size. |
outputFilePath |
- The directory in which you want to store image files. |
1 | plot.pathwayMap(simMat, path)
|
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