Description Usage Details Examples
View source: R/runAnnotationApp.R
runAnnotationApp runs annotator3D as a Shiny app. The user needs to upload FIMO matched motif TSV file and a TSV file containing predicted chromatin loops. The user can then customize parameters of visualization such as lower bound for loop membership score, and Gviz plotting options.
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Example TSV files are included in extdata
to run annotator3D.
1 2 3 4 | ## Not run:
runAnnotator()
## End(Not run)
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