Man pages for NHLBI-BCB/IKAP
IKAP: Identifying K mAjor cell Population group in single cell analysis

BottomUpMergeGenerate clusterings by iteratively merging two nearest...
ComputeMarkersCompute upregulated marker genes for each cell group in the...
DecisionTreeBuild decision trees for each cell group in the candidate...
ExpectedLogWCompute log expected sum of pairwise distances for a given...
GapStatisticCompute gap statistic
IKAPIKAP: Identifying K mAjor cell Population group in single...
NearestClusterReport the two clusters with the nearest centers
ObservedLogWCompute log observed sum of pairwise distances for a given...
PlotSummaryPlot the IKAP result
SelectCandidateSelect the candidate sets of cell groups
NHLBI-BCB/IKAP documentation built on March 21, 2020, 8:08 p.m.