SelectCandidate: Select the candidate sets of cell groups
In NHLBI-BCB/IKAP: IKAP: Identifying K mAjor cell Population group in single cell analysis
Description
Usage
Arguments
Examples
View source: R/SelectCandidate.R
Description
This function selects the candidate sets of cell groups based on the changes of gap statistics.
Usage
1
SelectCandidate(gap.gain)
Arguments
gap.gain
a numeric matrix for the increase of gap statistic from k-1 to k. Columns are
the number of clusters (k = 2 to k.max) and rows are the number of top principal components (nPC).
For example, the first column is the increase of gap statistic from k=1 to k=2 for each nPC (row).
Examples
1
SelectCandidate(gap.gain)
NHLBI-BCB/IKAP documentation built on March 21, 2020, 8:08 p.m.
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Description Usage Arguments Examples
View source: R/SelectCandidate.R
Description
This function selects the candidate sets of cell groups based on the changes of gap statistics.
Usage
1 | SelectCandidate(gap.gain)
|
Arguments
gap.gain |
a numeric matrix for the increase of gap statistic from k-1 to k. Columns are the number of clusters (k = 2 to k.max) and rows are the number of top principal components (nPC). For example, the first column is the increase of gap statistic from k=1 to k=2 for each nPC (row). |
Examples
1 | SelectCandidate(gap.gain)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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