ObservedLogW: Compute log observed sum of pairwise distances for a given...
In NHLBI-BCB/IKAP: IKAP: Identifying K mAjor cell Population group in single cell analysis
Description
Usage
Arguments
Examples
Description
This function computes log observed sum of pairwise distances for a given grouping. It first computes the sum of
pairwise distances for each group (cluster) and then takes log for the sum of sums acros all groups.
Usage
1
ObservedLogW(X, one.clustering)
Arguments
X
a numeric matrix. Columns are samples and rows are dimensions.
one.clustering
a vector indicating the clustering membership for each data point
Examples
1
ObservedLogW(pc.ranges, one.clustering)
NHLBI-BCB/IKAP documentation built on March 21, 2020, 8:08 p.m.
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Description Usage Arguments Examples
Description
This function computes log observed sum of pairwise distances for a given grouping. It first computes the sum of pairwise distances for each group (cluster) and then takes log for the sum of sums acros all groups.
Usage
1 | ObservedLogW(X, one.clustering)
|
Arguments
X |
a numeric matrix. Columns are samples and rows are dimensions. |
one.clustering |
a vector indicating the clustering membership for each data point |
Examples
1 | ObservedLogW(pc.ranges, one.clustering)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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