markers: Markers locations
In NKI-CCB/RUBIC: Recurrent DNA copy number break detection to identify driver aberrations
Description
Usage
Format
Examples
Description
The markers locations used by RUBIC example that indicates the exact
locations of measurement probes (markers) for the given platform.
For sequencing data, copy number values are often estimated with fixed
bin sizes (prior to segmentations). In this case each marker should be
associated with a bin and the center genomic position of the bin.
Usage
1
Format
data.table with 3 columns
- Name
Probe name
- Chromosome
Chromosome name
- Position
Probe position on the chromosome
Examples
1
NKI-CCB/RUBIC documentation built on Dec. 17, 2021, 5:17 a.m.
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Description Usage Format Examples
Description
The markers locations used by RUBIC example that indicates the exact locations of measurement probes (markers) for the given platform. For sequencing data, copy number values are often estimated with fixed bin sizes (prior to segmentations). In this case each marker should be associated with a bin and the center genomic position of the bin.
Usage
1 |
Format
data.table with 3 columns
- Name
Probe name
- Chromosome
Chromosome name
- Position
Probe position on the chromosome
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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