read.genes.info.tsv: Read Biomart annotation file.
In NKI-CCB/RUBIC: Recurrent DNA copy number break detection to identify driver aberrations
Description
Usage
Arguments
Value
Warning
Description
Read Biomart annotation file.
Usage
1
read.genes.info.tsv(build.file, filter.chr = NULL)
Arguments
build.file
The TSV file exported from Biomart.
filter.chr
A character vector of wanted chromosomes.
Value
The data.table containing the genome annotations.
Warning
This function is expecting at least the following headers: 'Ensembl Gene ID',
'Gene Start (bp)', 'Gene End (bp)', 'Chromosome Name', 'Associated Gene Name'.
NKI-CCB/RUBIC documentation built on Dec. 17, 2021, 5:17 a.m.
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Description Usage Arguments Value Warning
Description
Read Biomart annotation file.
Usage
1 | read.genes.info.tsv(build.file, filter.chr = NULL)
|
Arguments
build.file |
The TSV file exported from Biomart. |
filter.chr |
A character vector of wanted chromosomes. |
Value
The data.table containing the genome annotations.
Warning
This function is expecting at least the following headers: 'Ensembl Gene ID', 'Gene Start (bp)', 'Gene End (bp)', 'Chromosome Name', 'Associated Gene Name'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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