Description Usage Arguments Value Examples
View source: R/check.species.r
Returns the linked species name from the MGI homolog table, i.e. if you pass "mouse" it returns "mouse, laboratory". Essentially it's a convenience function so you don't need to write out "mouse, laboratory". It's intended primarily for use within the packages other functions and should not be generally called seperately.
1 | check.species(requestedSpecies, allSpecies)
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requestedSpecies |
String with the name of the first species, i.e. "mouse" |
allSpecies |
String with the names of all species from the MGI homolog table |
The name of the species in the MGI homolog table.
1 2 | allHomologs = load.homologs()
species1 = check.species(requestedSpecies="mouse",allSpecies=allHomologs$`Common Organism Name`)
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