continental_di: Parameter space of the continental diversity-independent...

In Neves-P/DAISIErobustness: Test the Robustness of DAISIE to Geodynamics and Traits

Parameter space of the continental diversity-independent analysis

Description

A dataset containing the DAISIE parameters for 192 parameter sets.

Format

A data frame with 192 rows and 10 variables:

time

Numeric defining the length of the simulation in time units

M

Numeric defining the size of mainland pool, i.e. the number of species that can potentially colonize the island

lac

lambda^c (cladogenesis rate)

mu

mu (extinction rate)

K

K (carrying capacity), set K=Inf for diversity independence

gam

gamma (immigration rate)

laa

lambda^a (anagenesis rate)

x_s

the probability of sampling a species from the mainland

x_nonend

the probability of the species sampled from the mainland being nonendemic

divdepmodel

Option divdepmodel = 'CS' runs a model with clade-specific carrying capacity, where diversity-dependence operates only within single clades, i.e. only among species originating from the same mainland colonist. Option divdepmodel = 'IW' runs a model with island-wide carrying capacity, where diversity-dependence operates within and among clades.

Neves-P/DAISIErobustness documentation built on May 22, 2024, 4:26 p.m.