createFitCaseControlModelArgs: Create a parameter object for the function...

In OHDSI/CaseControl: Case-Control

Create a parameter object for the function fitCaseControlModel

Description

Create a parameter object for the function fitCaseControlModel

Usage

createFitCaseControlModelArgs(
  useCovariates = FALSE,
  excludeCovariateIds = c(),
  includeCovariateIds = c(),
  profileGrid = NULL,
  profileBounds = c(log(0.1), log(10)),
  prior = createPrior("laplace", useCrossValidation = TRUE),
  control = createControl(cvType = "auto", startingVariance = 0.01, tolerance = 2e-07,
    cvRepetitions = 10, selectorType = "byPid", noiseLevel = "quiet")
)

Arguments

useCovariates	Whether to use the covariates in the caseControlsExposure.
excludeCovariateIds	Exclude these covariates from the model.
includeCovariateIds	Include only these covariates in the model.
profileGrid	A one-dimensional grid of points on the log(relative risk) scale where the likelihood for coefficient of variables is sampled. See details.
profileBounds	The bounds (on the log relative risk scale) for the adaptive sampling of the likelihood function.
prior	The prior used to fit the model. See createPrior for details.
control	The control object used to control the cross-validation used to determine the hyperparameters of the prior (if applicable). See createControl for details.

Details

Create an object defining the parameter values.

OHDSI/CaseControl documentation built on July 15, 2022, 6:33 a.m.