appendSqlCyclopsData: appendSqlCyclopsData

In OHDSI/Cyclops: Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis

appendSqlCyclopsData

Description

appendSqlCyclopsData appends data to an OHDSI data object.

Usage

appendSqlCyclopsData(
  object,
  oStratumId,
  oRowId,
  oY,
  oTime,
  cRowId,
  cCovariateId,
  cCovariateValue
)

Arguments

object	OHDSI Cyclops data object to append entries
oStratumId	Integer vector (optional): non-unique stratum identifier for each row in outcomes table
oRowId	Integer vector: unique row identifier for each row in outcomes table
oY	Numeric vector: model outcome variable for each row in outcomes table
oTime	Numeric vector (optional): exposure interval or censoring time for each row in outcomes table
cRowId	Integer vector: non-unique row identifier for each row in covariates table that matches a single outcomes table entry
cCovariateId	Integer vector: covariate identifier
cCovariateValue	Numeric vector: covariate value

Details

Append data using two tables. The outcomes table is dense and contains ... The covariates table is sparse and contains ... All entries in the outcome table must be sorted in increasing order by (oStratumId, oRowId). All entries in the covariate table must be sorted in increasing order by (cRowId). Each cRowId value must match exactly one oRowId value.

OHDSI/Cyclops documentation built on Feb. 9, 2024, 9:03 a.m.