Files in OHDSI/MethodEvaluation
Package for Evaluation of Estimation Methods
.Rbuildignore
.github/pull_request_template.md
.github/workflows/R_CMD_check_Hades.yml
.github/workflows/R_CMD_check_main_weekly.yaml
.gitignore
DESCRIPTION
MethodEvaluation.Rproj
NAMESPACE
NEWS.md
R/CreateReferenceSetCohorts.R
R/Mdrr.R
R/MethodEvaluation.R
R/Metrics.R
R/Plots.R
R/PositiveControlSynthesis.R
R/ShinyApps.R
R/SignalInjection.R
README.md
_pkgdown.yml
compare_versions
data/euadrReferenceSet.rda
data/ohdsiDevelopmentNegativeControls.rda
data/ohdsiNegativeControls.rda
data/omopReferenceSet.rda
deploy.sh
docs/404.html
docs/articles/OhdsiMethodsBenchmark.html
docs/articles/OhdsiMethodsBenchmark_files/header-attrs-2.6/header-attrs.js
docs/articles/index.html
docs/articles/shiny.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/pull_request_template.html
docs/reference/MethodEvaluation-package.html
docs/reference/MethodEvaluation.html
docs/reference/Rplot001.png
docs/reference/checkCohortSourceCodes.html
docs/reference/computeAucs.html
docs/reference/computeCoverage.html
docs/reference/computeMdrr.html
docs/reference/computeMetrics.html
docs/reference/computeMse.html
docs/reference/computeOhdsiBenchmarkMetrics.html
docs/reference/computeType1And2Error.html
docs/reference/createReferenceSetCohorts.html
docs/reference/euadrReferenceSet.html
docs/reference/findOrphanSourceCodes.html
docs/reference/index.html
docs/reference/injectSignals.html
docs/reference/launchMethodEvaluationApp.html
docs/reference/ohdsiDevelopmentNegativeControls.html
docs/reference/ohdsiNegativeControls.html
docs/reference/omopReferenceSet.html
docs/reference/packageCustomBenchmarkResults.html
docs/reference/packageOhdsiBenchmarkResults.html
docs/reference/plotControls.html
docs/reference/plotCoverageInjectedSignals.html
docs/reference/plotRocsInjectedSignals.html
docs/reference/synthesizePositiveControls.html
docs/reference/synthesizeReferenceSetPositiveControls.html
docs/sitemap.xml
extras/MethodEvaluation.pdf
extras/PackageMaintenance.R
extras/TestCode.R
inst/cohorts/ace_inhibitors.json
inst/cohorts/acute_pancreatitis.json
inst/cohorts/gi_bleed.json
inst/cohorts/ibd.json
inst/cohorts/stroke.json
inst/cohorts/thiazides_diuretics.json
inst/doc/OhdsiMethodsBenchmark.pdf
inst/ohdsiDevelopmentNegativeControls.rds
inst/ohdsiNegativeControls.rds
inst/rMarkDown/CohortSourceCodes.Rmd
inst/shinyApps/MethodEvalViewer/MethodEvalViewer.Rproj
inst/shinyApps/MethodEvalViewer/global.R
inst/shinyApps/MethodEvalViewer/plots.R
inst/shinyApps/MethodEvalViewer/server.R
inst/shinyApps/MethodEvalViewer/ui.R
inst/sql/sql_server/CohortSourceCodes.sql
inst/sql/sql_server/CopyOutcomes.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/CreateExposedCohorts.sql
inst/sql/sql_server/CreateOmopHois.sql
inst/sql/sql_server/GetExposedCohorts.sql
inst/sql/sql_server/GetOutcomes.sql
inst/sql/sql_server/GetPriorOutcomes.sql
inst/sql/sql_server/MDRR.sql
inst/sql/sql_server/MDRR_Drop_temp_tables.sql
inst/sql/sql_server/NegativeControls.sql
inst/sql/sql_server/NestingCohorts.sql
inst/sql/sql_server/ObservedPerCalendarMonth.sql
inst/sql/sql_server/OrphanCodeSearch.sql
inst/sql/sql_server/PrepareOrphanCodeSearch.sql
inst/sql/sql_server/SampleExposedCohorts.sql
inst/sql/sql_server/VignetteOutcomes.sql
inst/sql/sql_server/ace_inhibitors.sql
inst/sql/sql_server/acute_pancreatitis.sql
inst/sql/sql_server/gi_bleed.sql
inst/sql/sql_server/ibd.sql
inst/sql/sql_server/stroke.sql
inst/sql/sql_server/thiazides_diuretics.sql
man/MethodEvaluation-package.Rd
man/computeMdrr.Rd
man/computeMetrics.Rd
man/computeOhdsiBenchmarkMetrics.Rd
man/createReferenceSetCohorts.Rd
man/euadrReferenceSet.Rd
man/injectSignals.Rd
man/launchMethodEvaluationApp.Rd
man/ohdsiDevelopmentNegativeControls.Rd
man/ohdsiNegativeControls.Rd
man/omopReferenceSet.Rd
man/packageCustomBenchmarkResults.Rd
man/packageOhdsiBenchmarkResults.Rd
man/plotControls.Rd
man/plotCoverageInjectedSignals.Rd
man/plotRocsInjectedSignals.Rd
man/synthesizePositiveControls.Rd
man/synthesizeReferenceSetPositiveControls.Rd
tests/testthat.R
tests/testthat/test-01.R
tests/testthat/test-metrics.R
tests/testthat/test-package.R
tests/testthat/test-plots.R
vignettes/.gitignore
vignettes/OhdsiMethodsBenchmark.Rmd
vignettes/shiny.png
