README.md

In OHDSI/OhdsiStudy2: OHDSI Treatment Pathways Study Protocol 12 months

Treatment Pathways Study Protocol 12 months

This is a study of treatment pathways in hypertension, diabetes, and depression during the first 12 mo after diagnosis. Detailed information and protocol is available on the OHDSI Wiki.

R Version

• Run R

library(devtools)
install_github(c("OHDSI/SqlRender","OHDSI/DatabaseConnector","OHDSI/OhdsiStudy2"))
library(OhdsiStudy2)
?execute # To get extended help

execute(dbms = "postgresql",
        user = "joebruin",
        password = "supersecret",
        server = "myserver",
        cdmSchema = "cdm_schema",
        resultsSchema = "results_schema")

# To automatically email result files        
email(from = "[e-mail]",
      dataDescription = "CDM4 Simulated Data")        

• Email (if not already done in R) the result files (*.csv) to study coordinator.

If you would like to run the study directly from SQL without using R, contact the study administrator listed on the Wiki page.

OHDSI/OhdsiStudy2 documentation built on May 7, 2019, 8:27 p.m.