addMultipleRunPlpToDatabase: Populate the PatientLevelPrediction results tables

In OHDSI/PatientLevelPrediction: Developing patient level prediction using data in the OMOP Common Data Model

Populate the PatientLevelPrediction results tables

Description

This function formats and uploads results that have been generated via an ATLAS prediction package into a database

Usage

addMultipleRunPlpToDatabase(
  connectionDetails,
  databaseSchemaSettings = createDatabaseSchemaSettings(resultSchema = "main"),
  cohortDefinitions,
  databaseList = NULL,
  resultLocation = NULL,
  resultLocationVector,
  modelSaveLocation
)

Arguments

connectionDetails	A connection details created by using the function createConnectionDetails in the DatabaseConnector package.
databaseSchemaSettings	A object created by createDatabaseSchemaSettings with all the settings specifying the result tables
cohortDefinitions	A set of one or more cohorts extracted using ROhdsiWebApi::exportCohortDefinitionSet()
databaseList	(Optional) A list created by createDatabaseList to specify the databases
resultLocation	(string) location of directory where the main package results were saved
resultLocationVector	(only used when resultLocation is missing) a vector of locations with development or validation results
modelSaveLocation	The location of the file system for saving the models in a subdirectory

Details

This function can be used upload PatientLevelPrediction results into a database

Value

Returns NULL but uploads all the results in resultLocation to the PatientLevelPrediction result tables in resultSchema

OHDSI/PatientLevelPrediction documentation built on Sept. 15, 2024, 6:38 a.m.