createRunCmAnalysesArgs: Create a parameter object for defining the estimation...
In OHDSI/RiskStratifiedEstimation: Risk Stratified Effect Estimation

createRunCmAnalysesArgs

R Documentation

Create a parameter object for defining the estimation analyses.

Description

Create a parameter object for defining the estimation analyses.

Usage

createRunCmAnalysesArgs(
  label = NULL,
  riskStratificationMethod = "equal",
  stratificationOutcomes = "all",
  riskStratificationThresholds = 4,
  psMethod = "stratifyByPs",
  effectEstimationSettings = createStratifyByPsArgs(),
  timePoint = 365
)

Arguments

`label`	A single-word description of the analysis.
`riskStratificationMethod`	Can be "equal" for equal-sized risk strata; "quantile" for user-specified risk quantiles as thresholds; "custom" for user-specified risk thresholds
`stratificationOutcomes`	The outcome IDs on which risk stratification will be carried out. Should be a subset of the stratification outcomes defined in the 'analysisSettings'. Default is "all".
`riskStratificationThresholds`	The thresholds to be used for risk stratification. If 'riskStratificationMethod' is "equal" then it should be a single number denoting the number of equal-sized risk subgroups; if 'riskStratificationMethod' is "quantile", then it is a vector from 0 to 1 (increasing); if 'riskStratificationMethod' is "custom", then it is a vector with the predicted probabilities to be used as thresholds
`psMethod`	How should the propensity scores be used? Can be one of "stratifyByPs" or "matchOnPs".
`effectEstimationSettings`	Parameter object providing further settings for the implementation of selected `psMethod` to the estimation process. Can be created using one of `createStratifyByPsArgs` when `stratifyByPs` is selected or `createMatchOnPsArgs` when `matchOnPs` is selected.
`timePoint`	The time point after cohort start that absolute differences should be estimated.