API for OHDSI/StudyDiagnostics
Diagnostics for OHDSI Cohorts
| Global functions | |
|---|---|
| .createDataModel | Source code |
| .findOrphanConcepts | Source code |
| CohortDiagnostics | Man page |
| CohortDiagnostics-package | Man page |
| aggregateIr | Source code |
| checkIfCohortInstantiated | Source code |
| checkInputFileEncoding | Man page Source code |
| combineConceptSetsFromCohorts | Source code |
| computeChecksum | Source code |
| computeCohortCounts | Source code |
| computeIncidenceRates | Source code |
| createConceptCountsTable | Source code |
| createConceptTable | Source code |
| createDiagnosticsExplorerZip | Man page Source code |
| createIfNotExist | Source code |
| createMergedResultsFile | Man page Source code |
| createResultsDataModel | Man page Source code |
| enforceMinCellValue | Source code |
| enforceMinCellValueInDataframe | Source code |
| executeCohortCharacterization | Source code |
| executeCohortRelationshipDiagnostics | Source code |
| executeDiagnostics | Man page Source code |
| executeTimeSeriesDiagnostics | Source code |
| executeVisitContextDiagnostics | Source code |
| exportCharacterization | Source code |
| exportConceptInformation | Source code |
| exportConceptSets | Source code |
| extractConceptSetsJsonFromCohortJson | Source code |
| extractConceptSetsSqlFromCohortSql | Source code |
| getCdmDataSourceInformation | Man page Source code |
| getCodeSetId | Source code |
| getCodeSetIds | Source code |
| getCohortCharacteristics | Source code |
| getCohortCounts | Man page Source code |
| getDataMigrator | Man page Source code |
| getDefaultCovariateSettings | Man page Source code |
| getDefaultVocabularyTableNames | Man page Source code |
| getIncidenceRate | Source code |
| getInclusionStats | Source code |
| getKeyIndex | Source code |
| getParentCohort | Source code |
| getPrefixedTableNames | Source code |
| getRequiredTasks | Source code |
| getResultsDataModelSpecifications | Man page Source code |
| getTimeAsInteger | Source code |
| getVisitContext | Source code |
| getVocabularyVersion | Source code |
| hasData | Source code |
| instantiateUniqueConceptSets | Source code |
| isTaskRequired | Source code |
| launchDiagnosticsExplorer | Man page Source code |
| makeDataExportable | Source code |
| mergeTempTables | Source code |
| migrateDataModel | Man page Source code |
| naToZero | Source code |
| nullToEmpty | Source code |
| recode | Source code |
| recordTasksDone | Source code |
| runCohortRelationshipDiagnostics | Man page Source code |
| runCohortTimeSeriesDiagnostics | Man page Source code |
| runConceptSetDiagnostics | Source code |
| saveDatabaseMetaData | Source code |
| saveIncremental | Source code |
| subsetToRequiredCohorts | Source code |
| subsetToRequiredCombis | Source code |
| swapColumnContents | Source code |
| timeExecution | Source code |
| titleCaseToCamelCase | Source code |
| uploadResults | Man page Source code |
| writeResultsZip | Source code |
| writeToCsv | Source code |
| writeToCsv.default | Source code |
| writeToCsv.tbl_Andromeda | Source code |
