Files in OJWatson/evoflution
Forward in time epidemic and genetic simulator with a focus on flu
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/HKY85.R
R/JC69.R
R/K80.R
R/beast-R0-full.R
R/beast-R0-network-tracer-accumlation.R
R/bias-calculator.R
R/bias-mu-calculator.R
R/bias-plot.R
R/list_to_xml.R
R/nex-to-beast-xml.R
R/sampling.R
R/sequencing.R
R/sim.R
R/tracer-addon.R
Scripts/Mauscript_Submission_Pipeline.R
evoflution.Rproj
inst/extdata/A_California_07_2009(H1N1)_HA.rds
inst/extdata/template.xml
man/BEAST_R0_Full.Rd
man/BEAST_R0_Network_Pull_Tracer.Rd
man/Bias_Plot.Rd
man/HKY85.Rd
man/Infection_sim.Rd
man/JC69.Rd
man/K80.Rd
man/List_To_Xml.Rd
man/New_sampling.Rd
man/Nex_2_BEASTxml.Rd
man/Sequencing.Rd
man/Tracer_Addon.Rd
man/hello.Rd
notes/evoflutionTODO.txt
