## 'check_arg_cdm' ------------------------------------------------------------
test_that("'check_arg_cdm' returns TRUE when 'arg' is valid", {
expect_true(check_arg_cdm(arg = as.numeric(c(1:10, NA)),
nm_arg = "ratio",
counts_data = as.numeric(c(10:1, NA)),
neg_ok = FALSE,
zero_ok = TRUE))
})
test_that("'check_arg_cdm' throws correct error when 'arg' is non-numeric", {
expect_error(check_arg_cdm(arg = as.character(c(1:10, NA)),
nm_arg = "ratio",
counts_data = as.numeric(c(10:1, NA)),
neg_ok = FALSE,
zero_ok = TRUE),
"'ratio' has class 'character'")
})
test_that("'check_arg_cdm' throws correct error when 'arg' is integer", {
expect_error(check_arg_cdm(arg = c(1:10, NA),
nm_arg = "ratio",
counts_data = as.numeric(c(10:1, NA)),
neg_ok = FALSE,
zero_ok = TRUE),
"'ratio' has class 'integer'")
})
test_that("'check_arg_cdm' throws correct error when 'arg' is wrong length", {
expect_error(check_arg_cdm(arg = as.numeric(1:10),
nm_arg = "ratio",
counts_data = as.numeric(c(10:1, NA)),
neg_ok = FALSE,
zero_ok = TRUE),
"'ratio' has length 10 but 'counts_data' has length 11")
})
test_that("'check_arg_cdm' throws correct error when 'arg' has NAs in wrong places", {
expect_error(check_arg_cdm(arg = as.numeric(c(1:10, NA)),
nm_arg = "disp",
counts_data = as.numeric(10:0),
neg_ok = FALSE,
zero_ok = TRUE),
"'disp' has NA at position 11 but 'counts_data' does not")
})
test_that("'check_arg_cdm' throws correct error when 'arg' is negative", {
expect_error(check_arg_cdm(arg = as.numeric(c(1:10, -1)),
nm_arg = "disp",
counts_data = as.numeric(10:0),
neg_ok = FALSE,
zero_ok = FALSE),
"'disp' has negative values")
})
test_that("'check_arg_cdm' throws correct error when 'arg' is zero", {
expect_error(check_arg_cdm(arg = as.numeric(c(1:10, 0)),
nm_arg = "disp",
counts_data = as.numeric(10:0),
neg_ok = FALSE,
zero_ok = FALSE),
"'disp' has zeros")
})
## 'check_counts_data' --------------------------------------------------------
test_that("'check_counts_data' returns TRUE when 'counts_data' is valid", {
expect_true(check_counts_data(c(as.numeric(1:10), NA)))
})
test_that("'check_counts_data' throws correct error when 'counts_data' is valid", {
expect_error(check_counts_data("wrong"),
"is\\.numeric\\(counts_data\\) is not TRUE")
expect_error(check_counts_data(1L),
"is\\.integer\\(counts_data\\) is TRUE")
expect_error(check_counts_data(numeric()),
"'counts_data' has length 0")
expect_error(check_counts_data(c(-1, NA)),
"'counts_data' has negative values")
expect_error(check_counts_data(c(NA, 1.0001)),
"'counts_data' has non-integer values")
})
## 'check_disp_cdm' ------------------------------------------------------------
test_that("'check_disp_cdm' returns TRUE when 'disp' is valid", {
expect_true(check_disp_cdm(disp = as.numeric(c(1:10, NA)),
counts_data = as.numeric(c(10:1, NA))))
})
## 'check_prob' ---------------------------------------------------------------
test_that("'check_prob' returns TRUE when 'prob' is valid", {
expect_true(check_prob(0.8))
})
test_that("'check_prob' throws correct error when 'prob' is invalid", {
expect_error(check_prob("a"),
"'prob' is non-numeric")
expect_error(check_prob(c(0.8, 0.8)),
"'prob' does not have length 1")
expect_error(check_prob(NA_real_),
"'prob' is NA")
expect_error(check_prob(0),
"'prob' is less than or equal to 0")
expect_error(check_prob(1),
"'prob' is greater than or equal to 1")
})
## 'check_ratio_cdm' ------------------------------------------------------------
test_that("'check_ratio_cdm' returns TRUE when 'ratio' is valid", {
expect_true(check_ratio_cdm(ratio = as.numeric(c(0:9, NA)),
counts_data = as.numeric(c(10:1, NA))))
})
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