pFrequencyPlot: pFrequencyPlot()

In PNNL-Comp-Mass-Spec/RomicsProcessor: omics-oriented package for reproducible and sharable data processing pipelines

pFrequencyPlot()

Description

makes a frequency plot of the pvalues and adjustedpvalues (columns of the statistics layer ending by '_p' and '_padj')

Usage

pFrequencyPlot(romics_object, p_columns = "all", p = 0.05, bin_width = 0.01)

Arguments

romics_object	A romics_object created with the function romicsCreateObject()
p_columns	'all' by default, otherwise it can be a text vector containing the columns to be plotted.
p	indicate the target pvalue to be plotted with a red dotted bar.
bin_width	numeric vector, by default 0.01 indicate the width of the frequency bins

Details

plot all or a specified list of pvalue and adjusted pvalues frequency plots

Value

returns one or multiple plots

Author(s)

Geremy Clair

PNNL-Comp-Mass-Spec/RomicsProcessor documentation built on March 18, 2023, 5:14 a.m.