clusterDrugFamilyEfficacy: selects AUC data and molecular data nand builds heatmap of...

In PNNL-CompBio/amlresistancenetworks: Calculates networks that lead to AML resistance to drugs

selects AUC data and molecular data nand builds heatmap of single drug and the results of the prediction

Description

selects AUC data and molecular data nand builds heatmap of single drug and the results of the prediction

Usage

clusterDrugFamilyEfficacy(
  familyName = "MEK",
  meth = "RandomForest",
  data = "proteinLevels",
  doEnrich = FALSE,
  this.auc.dat = auc.dat,
  auc.thresh = 100,
  genes,
  data.mat = NULL,
  prefix = ""
)

Arguments

familyName	Name of drug to select from prediction results
meth	Method used to select predictors
data	Type of data to be plotted
auc.thresh	Threshold to determine if sample is sensitive
data.mat	Data frame of data to plot
auc.dat	AUC data from drug/samples
new.results	Prediction data frame

Value

filename of pdf

PNNL-CompBio/amlresistancenetworks documentation built on Feb. 8, 2025, 11:27 a.m.