convertToExpressionSet: Convert Expression data.frame to ExpressionSet
In Paradigm4/revealgenomics: SciDB REVEAL/Genomics API
Description
Convert Expression data.frame containing feature_id, biosample_id, value to Bioconductor ExpressionSet.
Following http://www.bioconductor.org/packages/release/bioc/vignettes/Biobase/inst/doc/ExpressionSetIntroduction.pdf
Usage
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convertToExpressionSet(
expr_df,
biosample_df,
feature_df,
measurementset_df,
featureNameAsFeatureIdentifier
)
Arguments
featureNameAsFeatureIdentifier
if TRUE, use FEATURE.name as feature identifier (if FALSE, use gene symbol)
Paradigm4/revealgenomics documentation built on April 7, 2020, 2:01 a.m.
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Description
Convert Expression data.frame containing feature_id, biosample_id, value to Bioconductor ExpressionSet.
Following http://www.bioconductor.org/packages/release/bioc/vignettes/Biobase/inst/doc/ExpressionSetIntroduction.pdf
Usage
1 2 3 4 5 6 7 | convertToExpressionSet(
expr_df,
biosample_df,
feature_df,
measurementset_df,
featureNameAsFeatureIdentifier
)
|
Arguments
featureNameAsFeatureIdentifier |
if TRUE, use FEATURE.name as feature identifier (if FALSE, use gene symbol) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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