plot_stratifying_features: Plot stratifying features

In ParkerICI/kumquat: Identification of stratifying subpopulations in Flow Cytometry Data (based on the Citrus package)

Description

Plot stratifying features

Usage

plot_stratifying_features(
  citrus.model,
  output.dir,
  by.cluster = FALSE,
  all.features = FALSE
)

Arguments

citrus.model	An object of class citrus.regressionResult, as returned from get_model
output.dir	The directory that will contain the output. Additional directories and sub-directories will be created in output.dir
by.cluster	If this is TRUE this function will generate a separate plot for each cluster, otherwise or a single plot with all the clusters. The latter option may take quite long to plot if there are several clusters
all.features	Whether to plot only the stratifying features (default) or all the features

ParkerICI/kumquat documentation built on Dec. 18, 2021, 6:40 a.m.