plotEstimates | R Documentation |
A convenience function to plot the estimates
plotEstimates(estimates, groups, plotNames, sigTest = wilcox.test, pAdjMethod = p.adjust.methods, comparisons = "all")
groups |
A names list of groups $groups part pf the cellTypeEstimate function's output |
plotNames |
a vector of strings. full address of the plots |
sigTest |
function to be used in calculation of p values for comparisons |
pAdjMethod |
character. which method to use when adjusting p values for multiple testing correction |
comparisons |
a 2 by n matrix that includes group name pairs, indicating which groups should be compared when calculating the p values. or "all" which will make comparison between all available groups by setting it to combn(groups,2) |
estimates. |
a named list of cell type estimates. $estimates part of the cellTypeEstimate function's output. |
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