permfunc: Test the difference of the network connectivity between two...

In PeterVerboon/lagnetw: The package builds a network for ESM data

Description

The function uses permutations to obtain p-values of the connectivity differences, used in permDif function.

Usage

permfunc(
  perms,
  dat,
  pb,
  outnames,
  pred,
  pnames,
  subset = NULL,
  nobs.per.person,
  group.per.person,
  type = "lagged",
  optim = "bobyqa"
)

Arguments

perms	number of permutations
dat	data frame
pb	name progressbar
outnames	vector with the names of the variables which are centered.
pred	formula with names of predictor variables for lmer.
pnames	vector with names of predictor variables.
subset	subset of predictor variables which are compared in summary statistics. If null then result is also null.
nobs.per.person	vector with number of observations per person
group.per.person	vector with group number for each person
type	type of analyses: lagged ("lagged") or contemporaneous predictors ("contemp")
optim	optimizer used in lmer, options: "bobyqa" or "Nelder_Mead", see lmerControl (lme4)

Value

matrix (4 x 3) with total differences, diagonal differences, off-diagonal differences, and differences between standard deviations, with their p-values (2 definitions).

PeterVerboon/lagnetw documentation built on Aug. 4, 2020, 5:16 p.m.