Man pages for PhHermann/LDJump
Estimating Variable Recombination Rates from Population Genetic Data
| calcRegMod | Calculate Regression Model under User Input Demography... |
| check_continue | Checks whether there are SNPs in each segment |
| get_impute_data | Data management to obtain data used for imputation |
| getPhi | Summary Statistics to estimate recombination from PhiPack |
| get_smuce | Segmentation Algorithm to Estimate Breakpoints in the... |
| impute | Imputation of estimated recombination rates for segments... |
| LDJump | Estimate Variable Recomination Rates from Population Genetic... |
| list.quantile.regs | Quantile Regressions for Bias Correction |
| mod.full | Regression model to Estimate (constant) Recombination Rates... |
| mod.full.demo | Regression model to Estimate (constant) Recombination Rates... |
| summary_statistics | Summary Statistics per Segment |
| vcfR_to_fasta | Conversion of vcf to fasta Format |
| vcf_statistics | Calculating statistics on VCF-files. |
