yeast: Spiked-in data set of reversibly oxidized cysteins

In PhilipBerg/PaiR: Imputation and Significance Analysis of Proteomics Data

Spiked-in data set of reversibly oxidized cysteins

Description

A dataset containing quantification of reversibly oxidized cysteines with true positives cysteines spiked-in from yeast at two different concentrations and true negatives from Chlamydomonas reinhardtii with the same concentration in all samples. For details see \insertCiteberg2019evaluation;textualpair and if you use this dataset please cite the same paper.

Usage

yeast

Format

A data frame with 2235 rows and 7 variables:

identifier

id column for features, true positives contains YEAST and true negatives contains Cre

ng50_*

Biological replicates with true positives spiked-in from 50 ng yeast cells

ng100_*

Biological replicates with true positives spiked-in from 100 ng yeast cells

Source

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2619-6

References

\insertAllCited

PhilipBerg/PaiR documentation built on March 18, 2022, noon