Man pages for PietaSchofield/pietalib
A Small Collection Of Useful Functions
| addCite | include citation for package in markdown |
| anscore | A N Spiess bigcore function |
| bigcor | large correlation matrix with ff |
| buildAll | Build an Rmarkdown file or directory of files into html |
| CitePres | Presentation citation |
| codeHook | simple knitr hook for code chunk referencing |
| delWeek | getWeek return the data for the week comencing |
| edt | edit a file |
| factorise | find divisors of an integer |
| genBibtex | genbibtex |
| generateHeaders | Some R functions for processing and analysing of genomics... |
| genPBSScript | Some R functions for processing and analysing of genomics... |
| getSpikeInNorm | get results from nicks spike-in db |
| getWeek | getWeek return the data for the week comencing |
| go | edit most recent note |
| knithook_plot | kniter hook for figure numbering |
| lck | list the citation keys for a package |
| ll | ll list full info on objects |
| logRun | logRun |
| logTime | Load data from OfficeTime export into my time recording DB... |
| multiplot | Multiple plot function |
| newFile | create a new notebook file |
| newNote | create a new notebook file |
| newProject | create a new project |
| pietalib | pietalib |
| pubGoD | render the current document |
| publish | Publish all relevant files from the local directory to my... |
| qstat | qstat |
| rcmd | execute a command remotely via ssh |
| readDREME | read in dreme results file |
| readENCODE | readENCODE read broadPeak and narrowPeak formats and return a... |
| readFC | readFC read a featureCount File |
| readMEME | read in meme xml results file into an R list structure |
| readPrism | Read a Prism file. |
| readPRISM | Read a Prism file. |
| readTRANSFACT | read a transfact PWM file |
| retGenBank | Retrieve GENBANK details |
| stripPlurals | rebuild a package |
| subJobCRUK | Submit a job to the cluster |
| subScript | subScript will submit a script to the cluster |
| sumForPlot | sumForPlot |
| view | simple wrapper to open a file at the commandline on a mac |
