generateHeaders: Some R functions for processing and analysing of genomics...
In PietaSchofield/pietalib: A Small Collection Of Useful Functions

Generate headers for running batch PBS jobs

generateHeaders(PBSscript, jobName = "myrun",
  jobDescription = "My analysis", Nnodes = 1, Nproc = 16,
  Memory = "32gb", Walltime = "30:00:00", delayTil = NULL,
  environ = TRUE, email = "pieta.schofield@cruk.manchester.ac.uk",
  overwrite = FALSE, log.dir = "/lustre/scratch/pschofield/tmp")

`PBSscript`	name of the script file
`jobName`	name of job
`jobDescription`	description of job
`Nnodes`	number of nodes requested
`Nproc`	number of cores requested
`Memory`	size of memory requested
`Walltime`	limit to run time
`delayTil`	time delay for start
`environ`	pass current environment variables
`email`	address to notify of job progress
`overwrite`	boolean overwrite existing scripts
`log.dir`	directory output logs