Files in PolicyAnalysisInc/heRoMod
Health Economic Modeling

.Rbuildignore

.circleci/config.yml

.gitignore

COPYING

DESCRIPTION

NAMESPACE

R/RcppExports.R R/acceptability_curve.R R/calibration.R R/cluster.R R/combine.R R/compatability.R R/complexity.r R/correct_counts.R R/covariance.R R/define_transition.R R/density.R R/dispatch_strategy.R R/efficiency_frontier.R R/error_codes.R R/evpi.R R/evppi_define.R R/evppi_eval.R R/evppi_print.R R/expand.R R/formula.R R/gho_mortality.R R/heRomod.R R/hero.R R/hero_bc.R R/hero_dsa.R R/hero_scenario.R R/hero_sensitivity_analysis.R R/hero_threshold.R R/hero_twsa.r R/hero_vbp.r R/hero_xlsx.R R/look_up.R R/matrix_define.R R/matrix_eval.R R/matrix_plot.R R/matrix_sparse.R R/newdata.R R/parallelsugar.R R/param_define.R R/param_eval.R R/param_print.R R/part_surv.R R/resamp_define.R R/resamp_eval.R R/resamp_print.R R/run_model_define.R R/run_model_summary.R R/sensitivity_define.R R/sensitivity_eval.R R/sensitivity_print.R R/states_define.R R/states_eval.R R/states_print.R R/strategy_define.R R/strategy_eval.R R/strategy_print.R

R/sysdata.rda

R/tabular_input.R R/theme_ggplot.R R/transform.R R/update.R R/utils.R R/vbp_define.R R/vbp_eval.R R/vbp_print.R R/zzz.R README.md

codecov.yml

data

data-raw/save_gho_mortality.R

inst/compat/checkimab.json

inst/compat/checkimab.rds

inst/compat/custompsm.json

inst/compat/custompsm.rds

inst/compat/fit.json

inst/compat/fit.rds

inst/compat/groups.json

inst/compat/groups.rds

inst/compat/markov.json

inst/compat/markov.rds

inst/compat/psm.json

inst/compat/psm.rds

inst/compat/ta447.json

inst/compat/ta447.rds

inst/hero/advanced_surv_modeling/bc_res.rds

inst/hero/advanced_surv_modeling/dsa_res.rds

inst/hero/advanced_surv_modeling/model.rds

inst/hero/advanced_surv_modeling/vbp_res.rds

inst/hero/example_simple_psm/bc_res.rds

inst/hero/example_simple_psm/dsa_res.rds

inst/hero/example_simple_psm/model.rds

inst/hero/example_simple_psm/vbp_res.rds

inst/hero/groups/bc_res.rds

inst/hero/groups/dsa_res.rds

inst/hero/groups/model.rds

inst/hero/groups/scen_res.rds

inst/hero/groups/scen_vbp_res.rds

inst/hero/groups/twsa_res.rds

inst/hero/groups/vbp_res.rds

inst/hero/markov_model/.DS_Store

inst/hero/markov_model/bc_res.rds

inst/hero/markov_model/dsa_res.rds

inst/hero/markov_model/model.rds

inst/hero/markov_model/scen_res.rds

inst/hero/markov_model/scen_vbp_res.rds

inst/hero/markov_model/twsa_res.rds

inst/hero/markov_model/vbp_res.rds

inst/hero/psm_responders/.DS_Store

inst/hero/psm_responders/bc_res.rds

inst/hero/psm_responders/dsa_res.rds

inst/hero/psm_responders/model.rds

inst/hero/psm_responders/vbp_res.rds

inst/hero/shared_st/bc_res.rds

inst/hero/shared_st/dsa_res.rds

inst/hero/shared_st/model.rds

inst/hero/shared_st/psa_res.rds

inst/hero/shared_st/scen_res.rds

inst/hero/shared_st/vbp_res.rds

inst/hero/sparse/bc_res.rds

inst/hero/sparse/model.rds

inst/hero/ta447/bc_res.rds

inst/hero/ta447/dsa_res.rds

inst/hero/ta447/model.rds

inst/hero/ta447/vbp_res.rds

inst/hero/time-dependency/bc_res.rds

inst/hero/time-dependency/model.rds

inst/media/logo.png

inst/tabular/surv/example_oncOptions.csv

inst/tabular/surv/example_oncParams.csv

inst/tabular/surv/example_oncParams_explicit_dists.csv

inst/tabular/surv/example_oncParams_nomatrix.csv

inst/tabular/surv/example_oncSpecs.csv

inst/tabular/surv/example_oncSpecs_explicit_dists.csv

inst/tabular/surv/example_oncSpecs_mixed.csv

inst/tabular/surv/example_oncSpecs_nomatrix.csv

inst/tabular/surv/example_oncSpecs_nomatrix_join.csv

inst/tabular/surv/example_oncSpecs_nomatrix_run.csv

inst/tabular/surv/example_oncSpecs_test_part_surv.csv

inst/tabular/surv/example_oncStates.csv

inst/tabular/surv/example_oncTransitionProbs.csv

inst/tabular/surv/example_use_fits_explicit_dists.csv

inst/tabular/surv/fake_fit_tib.csv

inst/tabular/surv/set_definitions_1.csv

inst/tabular/surv/set_definitions_2.csv

inst/tabular/surv/set_definitions_error_1.csv

inst/tabular/surv/surv_def_ok.csv

inst/tabular/surv/surv_table.csv

inst/tabular/surv/survival_data/OS.A.surv.fits.RData

inst/tabular/surv/survival_data/OS.B.surv.fits.RData

inst/tabular/surv/survival_data/PFS.A.surv.fits.RData

inst/tabular/surv/survival_data/PFS.B.surv.fits.RData

inst/tabular/surv/survival_data/set_def_pfs_os.csv

inst/tabular/surv/survival_data/set_definitions.csv

inst/tabular/surv/survival_data/surv_data_OS.csv

inst/tabular/surv/survival_data/surv_data_OS_eventcode.csv

inst/tabular/surv/survival_data/surv_data_PFS.csv

inst/tabular/surv/survival_data/surv_data_PFS_eventcode.csv

inst/tabular/surv/survival_info.csv

inst/tabular/surv/survival_info_eventcode.csv

inst/tabular/surv/survival_info_eventcode_error.csv

inst/tabular/surv/survival_info_explicit_dists.csv

inst/tabular/surv/survival_info_nomatrix_run.csv

inst/tabular/surv/use_fits.csv

inst/tabular/surv/use_fits_example0.csv

inst/tabular/surv/use_fits_join.csv

inst/tabular/surv/use_fits_mixed.csv

inst/tabular/test/.gitignore

inst/tabular/test/REFERENCE_1probmissing.csv

inst/tabular/test/REFERENCE_missingfunctions.csv

inst/tabular/test/THR_options.csv

inst/tabular/test/THR_parameters.csv

inst/tabular/test/THR_test_states.csv

inst/tabular/test/THR_test_transition_probs.csv

inst/tabular/test/THR_test_transition_probs_1missing.csv

inst/tabular/test/THR_test_transition_probs_2.csv

inst/tabular/test/THR_test_transition_probs_bad.csv

inst/tabular/test/bad_REFERENCE.csv

inst/tabular/test/example_multinom_params.csv

inst/tabular/test/example_multinom_params_dup_name.csv

inst/tabular/test/survival_spec_1.csv

inst/tabular/test/survival_spec_2.csv

inst/tabular/test/survival_spec_error_1.csv

inst/tabular/test/survival_spec_error_2.csv

inst/tabular/test/test_diff_mod_name/REFERENCE.csv

inst/tabular/test/test_diff_mod_name/THR_states.csv

inst/tabular/test/test_diff_mod_name/THR_transition_probs.csv

inst/tabular/test/test_no_output_dir/REFERENCE.csv

inst/tabular/test/test_no_output_dir/THR_demographic_table.csv

inst/tabular/test/test_no_output_dir/THR_options.csv

inst/tabular/test/test_no_output_dir/THR_parameters.csv

inst/tabular/test/test_no_output_dir/THR_states.csv

inst/tabular/test/test_no_output_dir/THR_transition_probs.csv

inst/tabular/test/test_no_output_dir/input_dataframes/mr_table.xlsx

inst/tabular/test/test_no_overwrite/REFERENCE.csv

inst/tabular/test/test_no_overwrite/THR_demographic_table.csv

inst/tabular/test/test_no_overwrite/THR_options.csv

inst/tabular/test/test_no_overwrite/THR_parameters.csv

inst/tabular/test/test_no_overwrite/THR_states.csv

inst/tabular/test/test_no_overwrite/THR_transition_probs.csv

inst/tabular/test/test_no_overwrite/input_dataframes/mr_table.xlsx

inst/tabular/test/test_no_overwrite/output/state_count_plot_standard.png

inst/tabular/test/testing_CSV_file_with_comment_col.csv

inst/tabular/test/testing_XLSX_file_with_comment_col.xlsx

inst/tabular/test/testing_XLS_file_with_comment_col.xls

inst/tabular/test/thr_trans/.gitignore

inst/tabular/test/thr_trans/REFERENCE.csv

inst/tabular/test/thr_trans/REFERENCE_2core.csv

inst/tabular/test/thr_trans/THR_demographic_table.csv

inst/tabular/test/thr_trans/THR_options.csv

inst/tabular/test/thr_trans/THR_options_2core.csv

inst/tabular/test/thr_trans/THR_parameters.csv

inst/tabular/test/thr_trans/THR_state_trans.csv

inst/tabular/test/thr_trans/THR_states.csv

inst/tabular/test/thr_trans/THR_transition_probs.csv

inst/tabular/test/thr_trans/input_dataframes/mr_table.xlsx

inst/tabular/test/toedit_REFERENCE.csv

inst/tabular/test/wrong_ext.tab

inst/tabular/thr/.gitignore

inst/tabular/thr/REFERENCE.csv

inst/tabular/thr/REFERENCE_2core.csv

inst/tabular/thr/THR_demographic_table.csv

inst/tabular/thr/THR_options.csv

inst/tabular/thr/THR_options_2core.csv

inst/tabular/thr/THR_parameters.csv

inst/tabular/thr/THR_states.csv

inst/tabular/thr/THR_transition_probs.csv

inst/tabular/thr/input_dataframes/mr_table.xlsx

man/acceptability_curve.Rd man/as_expr_list.Rd man/by_group.Rd man/by_group_hack.Rd man/by_strategy.Rd man/c_linear.Rd man/calibrate_model.Rd man/ce_strategy.Rd man/check_matrix.Rd man/check_names.Rd man/check_states.Rd man/check_strategy_index.Rd man/clean_factors.Rd man/cluster.Rd man/combine_models.Rd man/combine_probs.Rd man/compute_counts.Rd man/compute_evppi.Rd man/compute_icer.Rd man/compute_values.Rd man/create_demographic_table.Rd man/create_df_from_tabular.Rd man/create_matrix_from_tabular.Rd man/create_model_from_tabular.Rd man/create_model_list_from_tabular.Rd man/create_options_from_tabular.Rd man/create_parameters_from_tabular.Rd man/create_states_from_tabular.Rd man/define_calibration_fn.Rd man/define_correlation.Rd man/define_dsa.Rd man/define_evppi.Rd man/define_inflow.Rd man/define_init.Rd man/define_parameters.Rd man/define_part_surv.Rd man/define_part_surv_custom.Rd man/define_psa.Rd man/define_starting_values.Rd man/define_state.Rd man/define_state_list.Rd man/define_state_transition.Rd man/define_state_transition_list.Rd man/define_strategy.Rd man/define_transition.Rd man/define_vbp.Rd man/discount.Rd man/discount_hack.Rd man/dispatch_strategy.Rd man/dispatch_strategy_hack.Rd man/distributions.Rd man/eval_models_from_tabular.Rd man/eval_parameters.Rd man/eval_resample.Rd man/eval_state_list.Rd man/eval_strategy.Rd man/eval_strategy_newdata.Rd man/eval_transition.Rd man/export_savi.Rd man/file-checkers.Rd man/filter_blanks.Rd man/gather_model_info.Rd man/get_counts.Rd man/get_frontier.Rd man/get_matrix_order.Rd man/get_parameter_names.Rd man/get_state_names.Rd man/get_state_number.Rd man/get_state_value_names.Rd man/get_transition.Rd man/get_values.Rd man/heRomod.Rd man/heRomod_scale.Rd man/insert.Rd man/interpolate.Rd man/is.wholenumber.Rd man/list_all_same.Rd man/look_up.Rd man/make_names.Rd man/mclapply.Rd man/mclapply_socket.Rd man/modify.Rd man/p_comp.Rd man/param_in_strategy.Rd man/parse_multi_spec.Rd man/plot.dsa.Rd man/plot.evppi_res.Rd man/plot.psa.Rd man/plot.run_model.Rd man/plot.vbp.Rd man/plur.Rd man/probability.Rd man/read_file.Rd man/reexports.Rd man/reindent_transition.Rd man/rescale_discount_rate.Rd man/resolve_dependencies.default.Rd man/run_bcea.Rd man/run_dsa.Rd man/run_model.Rd man/run_model_tabular.Rd man/run_psa.Rd man/run_vbp.Rd man/safe_conversion.Rd man/save_outputs.Rd man/summary.run_model.Rd man/summary.vbp.Rd man/update_model.Rd man/who_mortality.Rd man/wtd_summary.Rd

src/.gitignore

src/RcppExports-ed4ceba3.o.tmp

src/RcppExports.cpp

src/code-3d31645c.o.tmp

src/code.cpp

tests/testthat.R

tests/testthat/.gitignore

tests/testthat/_snaps/hero.md tests/testthat/_snaps/threshold.md tests/testthat/helper_compat.R tests/testthat/helper_hero.R

tests/testthat/results.json

vignettes/.gitignore

vignettes/a_introduction.R vignettes/a_introduction.Rmd vignettes/b_time_dependency.R vignettes/b_time_dependency.Rmd vignettes/c_homogeneous.R vignettes/c_homogeneous.Rmd vignettes/d_non_homogeneous.R vignettes/d_non_homogeneous.Rmd vignettes/e_probabilistic.R vignettes/e_probabilistic.Rmd vignettes/f_sensitivity.R vignettes/f_sensitivity.Rmd vignettes/g_heterogeneity.R vignettes/g_heterogeneity.Rmd vignettes/h_tabular.R vignettes/h_tabular.Rmd vignettes/i_reproduction.R vignettes/i_reproduction.Rmd vignettes/k_calibration.R vignettes/k_calibration.Rmd vignettes/l_value_based_pricing.R vignettes/l_value_based_pricing.Rmd vignettes/m_expected_value_partial_perfect_information.R vignettes/m_expected_value_partial_perfect_information.Rmd

PolicyAnalysisInc/heRoMod documentation built on March 23, 2024, 4:29 p.m.

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PolicyAnalysisInc/heRoMod
Health Economic Modeling

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Health Economic Modeling

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PolicyAnalysisInc/heRoMod Health Economic Modeling

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PolicyAnalysisInc/heRoMod
Health Economic Modeling

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Health Economic Modeling