Files in PratheepaJ/BARBI
A Bayesian Approach to Contamination Removal in Molecular Microbial Studies
.Rbuildignore
.Rhistory
BARBI.Rproj
DESCRIPTION
NAMESPACE
R/BARBI.R
R/LDAtopicmodel.R
R/MH_MCMC.R
R/alphaBetaContInPlasma.R
R/alphaBetaNegControl.R
R/posterior.R
R/proposalFunction.R
R/ps.R
R/psBlockResults.R
R/samplingPosterior.R
R/stanmodels.R
README.md
configure
configure.win
data/ps.rda
docs/404.html
docs/_pkgdown.yaml
docs/articles/BARBI.html
docs/articles/BARBI_files/figure-html/filter-samples-1.png
docs/articles/BARBI_files/figure-html/make_tables-1.png
docs/articles/BARBI_files/figure-html/make_tables-2.png
docs/articles/BARBI_files/figure-html/make_tables-3.png
docs/articles/BARBI_files/figure-html/make_tables-4.png
docs/articles/BARBI_files/figure-html/make_tables-5.png
docs/articles/BARBI_files/figure-html/make_tables-6.png
docs/articles/BARBI_files/figure-html/make_tables-7.png
docs/articles/BARBI_files/figure-html/make_tables-8.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-1.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-2.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-3.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-4.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-5.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-6.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-7.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-2-8.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-6-1.png
docs/articles/BARBI_files/figure-html/unnamed-chunk-8-1.png
docs/articles/index.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/BARBI.html
docs/reference/LDAtopicmodel.html
docs/reference/MH_MCMC.html
docs/reference/alphaBetaContInPlasma.html
docs/reference/alphaBetaNegControl.html
docs/reference/index.html
docs/reference/posterior.html
docs/reference/proposalFunction.html
docs/reference/ps.html
docs/reference/psBlockResults.html
docs/reference/samplingPosterior.html
inst/include/stan_meta_header.hpp
inst/stan/include/license.stan
inst/stan/lda.stan
man/BARBI.Rd
man/LDAtopicmodel.Rd
man/MH_MCMC.Rd
man/alphaBetaContInPlasma.Rd
man/alphaBetaNegControl.Rd
man/posterior.Rd
man/proposalFunction.Rd
man/ps.Rd
man/psBlockResults.Rd
man/samplingPosterior.Rd
src/BARBI.so
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/RcppExports.o
src/stanExports_lda.cc
src/stanExports_lda.h
src/stanExports_lda.o
vignettes/BARBI.Rmd
vignettes/BARBI.bib
