alphaBetaNegControl: Compute gamma distirbution parameters in negative control...
In PratheepaJ/BARBI: A Bayesian Approach to Contamination Removal in Molecular Microbial Studies

Computes the gamma distribution parameters for the intensity of contamination using negative control samples in each block.

1	alphaBetaNegControl(psNCbyBlock, stringent = FALSE)

`psNCbyBlock`	A list of phyloseq objects with all negative control samples in each block.
`stringent`	Logical, TRUE/FALSE: (i) TRUE use the sample mean of non-zero abundances in the negative control samples for the taxa with mean less than 1, and (ii) FALSE use the less than one mean.

A list of estimated distribution parameters for the intensity of contamination in negative control samples.

## Not run: 
alphaBetaNegControl(psNCByBlock)

## End(Not run)

PratheepaJ/BARBI documentation built on April 16, 2020, 11:51 a.m.

PratheepaJ/BARBI index

README.md

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description