Files in PriceLab/TrenaViz
TrenaViz
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/BindingSitesManager.R
R/FimoModelWidget.R
R/GeneGeneExpressionPlotter.R
R/ModuleExample.R
R/MotifsInRegionsBuilder.R
R/MultiMethodMotifMatcher.R
R/NetworkView.R
R/TrenaViz.R
R/trackFileUploader.R
R/tvHelpers.R
R/utils.R
README.md
inst/apps/igap/Dockerfile
inst/apps/igap/Rprofile.site
inst/apps/igap/docker
inst/apps/igap/igap.R
inst/apps/igap/makefile
inst/apps/igap/packages/makefile
inst/apps/igap/testDB.R
inst/apps/igap/trenaViz.R
inst/css/fimoDatabaseModelBuilder.css
inst/css/trenaViz.css
inst/demo/erythropoiesis.R
inst/demo/igap.R
inst/devel/cyjShiny.css
inst/devel/devel_BindingSitesManager.R
inst/devel/devel_FimoModelWidget.R
inst/devel/devel_GeneGeneExpressionPlotter.R
inst/devel/devel_ModuleExample.R
inst/devel/devel_MotifsInRegionsBuilder.R
inst/devel/devel_NetworkView.R
inst/devel/dynamicTabCreation.R
inst/devel/fimoDatabaseModelBuilder.css
inst/devel/gata2.model.RData
inst/devel/moduleExample.css
inst/devel/tbls.regulatoryRegions.RData
inst/devel/ui-sketches/FimoDatabaseModelBuilder.R
inst/extdata/HAVCR2.RData
inst/extdata/fimo-matches-table.RData
inst/extdata/footprintDatabase-matches-table.RData
inst/extdata/model.and.regRegions.irf4.top5.RData
inst/extdata/tbl.regRegions-GATA2.RData
inst/extdata/trenaModelStyle.js
inst/extdata/video/videoTutorial.html
inst/js/bindingSitesManager.js
inst/js/fimoBuilder.js
inst/js/moduleExample.js
inst/js/networkView.js
inst/js/trenaViz.js
inst/unitTests/ad.R
inst/unitTests/dashboardTemplate.R
inst/unitTests/gata2.model.RData
inst/unitTests/testGBM.R
inst/unitTests/test_BindingSitesManager.R
inst/unitTests/test_MultiMethodMotifMatcher.R
inst/unitTests/test_NetworkView.R
inst/unitTests/test_NetworkViewInShiny.R
inst/unitTests/test_TrenaViz.R
inst/unitTests/test_utils.R
inst/unitTests/www/custom.css
makefile
man/BindingSitesManager.Rd
man/FimoModelWidget.Rd
man/GeneGeneExpressionPlotter.Rd
man/ModuleExample.Rd
man/MotifsInRegionsBuilder.Rd
man/MultiMethodMotifMatcher.Rd
man/NetworkView.Rd
man/TrenaViz.Rd
man/addEventHandlers.Rd
man/createApp.Rd
man/createMotifModelBuilderPage.Rd
man/createPage.Rd
man/createServer.Rd
man/createUI.Rd
man/displayPage.Rd
man/matchMotifInSequence.Rd
man/removeLogos.Rd
man/renderLogos.Rd
man/setGenes.Rd
man/setGenome.Rd
man/setGenomicRegion.Rd
man/setMatrixForPlotting.Rd
man/setOrganism.Rd
man/setRegulatoryRegions.Rd
man/setTF.Rd
man/setTargetGene.Rd
man/setTrenaProject.Rd
man/standardizeMotifMatchedTable.Rd
misc/explore/tables/DataTable/app.R
misc/explore/tables/DataTable/docker/Dockerfile
misc/explore/tables/DataTable/docker/app.R
misc/explore/tables/DataTable/docker/makefile
misc/explore/tables/simple/app.R
runFromRecipe.R
