GetSeqLength: Connect and parse UniProt Sequences information.
In Proteomicslab57357/UniprotR: Retrieving Information of Proteins from Uniprot
GetSeqLength R Documentation
Connect and parse UniProt Sequences information.
Description
The function is work to retrieve Sequence's Length data from Uniparc for a list of proteins accessions.
This function was added to overcome the NAs returned when Uniprot database deleted the protein from the database
Usage
GetSeqLength(ProteinAccList, directorypath = NULL)
Arguments
ProteinAccList
Vector of UniProt Accession/s
directorypath
path to save excel file containig results returened by the function
Value
DataFrame where rows names are the accession
and columns contains the information retrieved from the UniProt
Note
The function also, Creates a csv file with the retrieved information.
Author(s)
Mohmed Soudy Mohamed.soudy@57357.com and Ali Mostafa ali.mo.anwar@std.agr.cu.edu.eg
Examples
Obj <- GetSeqLength("O14520")
Proteomicslab57357/UniprotR documentation built on Sept. 11, 2023, 8:56 p.m.
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| GetSeqLength | R Documentation |
Connect and parse UniProt Sequences information.
Description
The function is work to retrieve Sequence's Length data from Uniparc for a list of proteins accessions. This function was added to overcome the NAs returned when Uniprot database deleted the protein from the database
Usage
GetSeqLength(ProteinAccList, directorypath = NULL)
Arguments
ProteinAccList |
Vector of UniProt Accession/s |
directorypath |
path to save excel file containig results returened by the function |
Value
DataFrame where rows names are the accession and columns contains the information retrieved from the UniProt
Note
The function also, Creates a csv file with the retrieved information.
Author(s)
Mohmed Soudy Mohamed.soudy@57357.com and Ali Mostafa ali.mo.anwar@std.agr.cu.edu.eg
Examples
Obj <- GetSeqLength("O14520")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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