imPlot2: Modified image.plot function from "fields" package, the grey...

In Przemol/seqplots: An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and heatmaps

Modified image.plot function from "fields" package, the grey rectangle is used as background for heatmap, making NAs distinguishable from the data

Description

#added following line of code: rect(usr[1], usr[3], usr[2], usr[4], col="grey") This function is package internal and should not be executed directly by users.

Usage

imPlot2(..., add = FALSE, nlevel = 64, horizontal = FALSE,
  legend.shrink = 0.9, legend.width = 1.2,
  legend.mar = ifelse(horizontal, 3.1, 5.1), legend.lab = NULL,
  legend.line = 2, graphics.reset = FALSE, bigplot = NULL,
  smallplot = NULL, legend.only = FALSE, col = tim.colors(nlevel),
  lab.breaks = NULL, axis.args = NULL, legend.args = NULL,
  midpoint = FALSE, border = NA, lwd = 1, xinds = NULL, e = NULL,
  ylast = 0, afs = 1)

Details

For more help see documentation of image.plot function: image.plot

Value

NULL

Przemol/seqplots documentation built on May 14, 2022, 6:47 a.m.