Man pages for PuttickMacroevolution/cladeMode
nested modes of evolution
| ACDC.prior | ACDC.prior function from Geiger |
| aicc | aicc function |
| aiccWeight | aicc weight function |
| arbutus | arbutus modified function from arbutus |
| BranchingTimesFossil | BranchingTimesFossil function from Graham Slater |
| cladeMode | Analyse nested modes of evolution |
| cladeModeNode | Analyse nested modes of evolution - internal function |
| cladeModeSim | Simulate nested modes of evolution |
| ebSubClade | Rescale phylogeny with early burst values |
| ebSubClade_rescale | Rescale phylogeny with early burst values |
| findNodes | findNodes function |
| getNodes | getNodes function |
| make_unit_tree.phylo | make_unit_tree.phylo function from arbutus |
| model_sim | model_sim |
| monoClade | identify nodes of a monophyletic clade |
| monoTips | monoTips |
| nodeDes | nodeDes |
| ouMatrix | ouMatrix function from Graham Slater |
| OUtree | rateClade function |
| phyIC | independent contrasts calculation |
| phylogMean | phylogMean function from Graham Slater |
| randomNode | randomNode |
| rateClade | rateClade function |
| reScalePhylo | reScalePhylo function |
| rescalePIC | rescalePIC function |
| split.vcv.node | split.vcv.node |
| subClade | subClade function |
| treeSimToApe | convert treeSim to APE |
