downloadGTEx: Download GTEx files and turn them into ExpressionSet object

Description Usage Arguments Value Examples

Description

Downloads the V6 GTEx release and turns it into an ExpressionSet object.

Usage

1
downloadGTEx(type = "genes", file = NULL, ...)

Arguments

type

Type of counts to download - default genes.

file

File path and name to automatically save the downloaded GTEx expression set. Saves as a RDS file.

...

Does nothing currently.

Value

Organized ExpressionSet set.

Examples

1
# obj <- downloadGTEx(type='genes',file='~/Desktop/gtex.rds')

QuackenbushLab/yarn documentation built on May 8, 2019, 3:49 a.m.