crossStudyNormalize: Cross-Study normalize an expressionSet object based on a...

In RGLab/ImmuneSignatures2: Pre-Processing for HIPC ImmuneSignatures2 Analysis

Cross-Study normalize an expressionSet object based on a single vendor's subset of expression data to define the target distribution

Description

Cross-Study normalize an expressionSet object based on a single vendor's subset of expression data to define the target distribution

Usage

crossStudyNormalize(
  eset,
  targetDistributionVendor,
  targetDistributionExcludedStudies
)

Arguments

eset	expressionSet
targetDistributionVendor	Microarray or RNAseq vendor to use for generating target distribution
targetDistributionExcludedStudies	studies to exclude when generating the target distribution

RGLab/ImmuneSignatures2 documentation built on Dec. 9, 2022, 10:51 a.m.