cyto_install_deps: Install package dependencies if needed.

In RGLab/cytoinstaller: cyto package Installation from repositories, Including 'bioconductor' and 'GitHub'

Description

Install package dependencies if needed.

Usage

cyto_install_deps(
  pkgdir = ".",
  dependencies = NA,
  repos = getOption("repos"),
  type = getOption("pkgType"),
  upgrade = c("default", "ask", "always", "never"),
  quiet = FALSE,
  build = TRUE,
  build_opts = c("--no-resave-data", "--no-manual", "--no-build-vignettes"),
  build_manual = FALSE,
  build_vignettes = FALSE,
  bioc_ver = bioc_version(),
  ...
)

Arguments

build	If 'TRUE' build the package before installing.
build_opts	Options to pass to 'R CMD build', only used when 'build'
build_manual	If ‘FALSE', don’t build PDF manual ('–no-manual').
build_vignettes	If ‘FALSE', don’t build package vignettes ('–no-build-vignettes'). is 'TRUE
...	additional arguments passed to [utils::install.packages()].

Examples

## Not run: 
cyto_install_deps("../ggcyto")

## End(Not run)

RGLab/cytoinstaller documentation built on Dec. 31, 2020, 4:21 p.m.