Description Objects from the Class Slots Methods Author(s) Examples
This class represents the output of 'flowDensity(.)' function from flowDensity package.
Objects can be created by calls of the form new("CellPopulation", ...)
.
flow.frame
:Object of class "flowFrame"
representing the flow cytometry data of the cell population
proportion
:Object of class "numeric"
representing proportion of the cell population with respect to its parent cell population
cell.count
:Object of class "numeric"
representing cell count of the cell population
channels
:Object of class "character"
representing channel names corresponding to the 2 dimensions where the cell population is extracted
position
:Object of class "logical"
representing position of the cell population in the 2-dimensional space
gates
:Object of class "numeric"
representing thresholds on each channel used to gate the cell population
filter
:Object of class "matrix"
representing boundary of the cell population using a convex polygon
index
:Object of class "numeric"
representing indices of the data points in the cell population with respect to its parent cell population
signature(obj = "CellPopulation", channels = "ANY", position = "logical", singlet.gate = "missing")
: ...
signature(obj = "CellPopulation", channels = "missing", position = "missing", singlet.gate = "logical")
: ...
signature(obj = "CellPopulation")
: ...
signature(x = "flowFrame", y = "CellPopulation")
: ...
Jafar Taghiyar <email: <jtaghiyar@bccrc.ca>>
1 | showClass("CellPopulation")
|
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