Man pages for RGLab/flowIncubator
Routines that don't belong to the core flow packages yet.
| extract_citrus_clusters | This function extracts clusted flow cytometric expression... |
| flowIncubator | Routines that don't belong to the core flow packages yet |
| getData | Return the flowSet associated with a GatingSet by boolean... |
| get_groups | Step 1: determine which group to parse for each xml workspace |
| getIndices | routine to return the indices by specify boolean combination... |
| grep.FCS | a uility function to match fcs files based on the channels... |
| ksstat | kstest An Rcpp implementation returning the ks statistic... |
| merge_gs | this is the wrapper for labkey where only one gslist to be... |
| nearestSamples | impute the gate (flagged as failure by external algorithm)... |
| parse_xmls | Step 2: parse the entire batches |
| plotGate_labkey | plot by prarent index |
| plotGateM | get parent data get overlay data |
| regateNearestSamples | perform the actual regating of identified bad samples with... |
| runTSNE | run tSNE from (R pkg 'Rtsne') on a gatingSet Will sample the... |
| save_gslist_labkey | a wrapper for 'save_gslist' |
| swapChannelMarker | A wrapper that swaps the channel names with marker names |
| swapChannelMarker_flowframe | Preprocesses a Cytotrol flowFrame object |
