get_groups: Step 1: determine which group to parse for each xml workspace

In RGLab/flowIncubator: Routines that don't belong to the core flow packages yet.

Description

The regular expression may not always pick up the correct group for each xml. Thus it is safer to separate this step from parsing so that users get to review and edit(if necessary) the resolved group results.

Usage

get_groups(files, pattern)

Arguments

files	character vector, full paths of 'xml' workspace files
pattern	character a regular expression to specifiy which group to parse

Value

a list of opened workspace objects and the group names matched by regular expression.

Examples

## Not run: 
 wsFiles <- list.files(dataPath, pattern = ".xml", full = T)
 groups <- get_groups(wsFiles, "(_MD)|(_SK)")

## End(Not run)

RGLab/flowIncubator documentation built on Sept. 5, 2020, 11:10 p.m.