## ----eval=FALSE,echo=TRUE------------------------------------------------
# library(devtools)
# install_github("RGLab/opencytoCL")
## ---- eval=FALSE,results="asis"------------------------------------------
# install_openCytoCL()
## ------------------------------------------------------------------------
if(!library(flowWorkspaceData,logical.return = TRUE)){
source("https://bioconductor.org/biocLite.R")
biocLite("flowWorkspaceData")
}
## ----echo=FALSE----------------------------------------------------------
fcs_path = system.file(package="flowWorkspaceData","extdata")
tmp = tempdir()
file.copy(list.files(path=fcs_path,pattern="CytoTrol.*",full=TRUE),to = tmp)
system(paste0("opencyto process ",tmp," /tmp/cytotrol --compensate --transform --annotate='$FIL'"))
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.