add_sample_data: Select sample data variables and add them to the count...

Description Usage Arguments Value

View source: R/sample_data_functions.r

Description

This function selects specified columns from the sample data of a phyloseq object and iteratively merges each count table with the specified sample data columns. Merging occurs using the row.names.

Usage

1
add_sample_data(sample_data_names, phyloseq_object, community_tables)

Arguments

sample_data_names

a vector of sample data variable names

phyloseq_object

the phyloseq object containing the sample data

community_tables

the list with relative abundance community tables

Value

A list of the merged community + sample data tables as data.frames


RJ333/phyloseq2ML documentation built on June 2, 2020, 9:25 p.m.