rEncod: Generate random encodings

In RSamyak/fmatrix: F-Matrix Manipulation

Generate random encodings

Description

Generate random encodings according to either BF model or uniform

Usage

rEncod(
  m,
  n,
  distr = c("BF", "uniform", "aldous"),
  b = 0,
  a = b,
  alpha = 1,
  eta = 1,
  type = c("encod", "hEncod"),
  ...
)

Arguments

m	number of trees to generate
n	n+1 is the number of tips of the tree
b	beta parameter in BF model of SV2016. Default b = 0 gives the Yule / Kingman model
a	alpha parameter in BF model of SV 2016. Default is a = b for BF model.
type	flag to switch between isochronous and hetero chronous versions of encodings

RSamyak/fmatrix documentation built on May 31, 2024, 12:29 a.m.