clinical.20160128: clinical datasets from TCGA project from 2016-01-28 release...

In RTCGA/RTCGA.clinical.20160128: Clinical datasets from The Cancer Genome Atlas Project from 2016-01-28

Description

Package provides clinical datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Data were downloaded using RTCGA-package and contain snapshots for the release date: 2016-01-28 . Visit RTCGA site: http://rtcga.github.io/RTCGA/. Use cases, examples and information about datasets in RTCGA.clinical.20160128 can be found here: browseVignettes("RTCGA"). Link to the data format explanation is in the package DESCRIPTION file.

Usage

ACC.clinical.20160128(metadata = FALSE)

BLCA.clinical.20160128(metadata = FALSE)

BRCA.clinical.20160128(metadata = FALSE)

CESC.clinical.20160128(metadata = FALSE)

CHOL.clinical.20160128(metadata = FALSE)

COADREAD.clinical.20160128(metadata = FALSE)

DLBC.clinical.20160128(metadata = FALSE)

ESCA.clinical.20160128(metadata = FALSE)

FPPP.clinical.20160128(metadata = FALSE)

GBMLGG.clinical.20160128(metadata = FALSE)

HNSC.clinical.20160128(metadata = FALSE)

KICH.clinical.20160128(metadata = FALSE)

KIPAN.clinical.20160128(metadata = FALSE)

KIRC.clinical.20160128(metadata = FALSE)

KIRP.clinical.20160128(metadata = FALSE)

LAML.clinical.20160128(metadata = FALSE)

LIHC.clinical.20160128(metadata = FALSE)

LUAD.clinical.20160128(metadata = FALSE)

LUSC.clinical.20160128(metadata = FALSE)

MESO.clinical.20160128(metadata = FALSE)

OV.clinical.20160128(metadata = FALSE)

PAAD.clinical.20160128(metadata = FALSE)

PCPG.clinical.20160128(metadata = FALSE)

PRAD.clinical.20160128(metadata = FALSE)

SARC.clinical.20160128(metadata = FALSE)

SKCM.clinical.20160128(metadata = FALSE)

STAD.clinical.20160128(metadata = FALSE)

STES.clinical.20160128(metadata = FALSE)

TGCT.clinical.20160128(metadata = FALSE)

THCA.clinical.20160128(metadata = FALSE)

THYM.clinical.20160128(metadata = FALSE)

UCEC.clinical.20160128(metadata = FALSE)

UCS.clinical.20160128(metadata = FALSE)

UVM.clinical.20160128(metadata = FALSE)

Arguments

metadata

A logical indicating whether load data into the workspace (default, FALSE) or to only display the object's metadata (TRUE). See examples.

Details

browseVignettes("RTCGA")

Source

http://gdac.broadinstitute.org/

Examples

## Not run: 
 ACC.clinical.20160128(metadata = TRUE) 
 ACC.clinical.20160128(metadata = FALSE) 
 ACC.clinical.20160128 

## End(Not run)

RTCGA/RTCGA.clinical.20160128 documentation built on May 8, 2019, 7:35 a.m.