list_packages: List conda envs

In RajLabMSSM/echoconda: echoverse module: conda environment management

List conda envs

Description

Alternative method for finding packages without relying on the (currently) internal function reticulate::conda_list_packages.

Usage

list_packages(
  packages = NULL,
  conda_env,
  method = c("r", "reticulate", "basilisk"),
  conda = "auto",
  verbose = TRUE
)

Arguments

packages	A package (e.g. "pandas") or a list of packages (e.g. c("pandas","r-dplyr","bgzip")). Will recognize R packages with or without the prefixes "r-" and "bioconductor-" (i.e. "r-dplyr" is equivalent to "dplyr").
conda_env	Conda environments to search in. If NULL (default), will search all conda environments.
method	Method to use: "basilisk" "reticulate"
conda	The path to a conda executable. Use "auto" to allow reticulate to automatically find an appropriate conda binary. See Finding Conda and conda_binary() for more details.
verbose	Print messages.

RajLabMSSM/echoconda documentation built on June 6, 2024, 10:38 a.m.